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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16828095_16828189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16828095 - 16828189

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGGCGG

5'SS Class:

major

3'SS Sequence:

GTTTCCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

GGTAATTCACCT

Flanking Amino Acid:

LARLNLKTVNVTYFTSLSRQ

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

53.4

45.1

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

68.1

0.41

63.4

38.1

Minor 5ss

27.1

-2.6

3.2

41.8

Minor BPS

43.4

-0.4

1.9

59.78

43.1

Associated Gene:

Gene:

PTCHD3

Ensembl Gene ID:

ENSAPLG00000013648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014212

16827366 - 16835483

8118