Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_16851232_16852026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16851232 - 16852026

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TAGTTCTAAACT

Flanking Amino Acid:

NFCSDLRCWPVYIQSRSFKT

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.1

0.61

78.6

33.6

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

67.1

0.61

1.7

80.47

41.5

Associated Gene:

Gene:

YME1L1

Ensembl Gene ID:

ENSAPLG00000012942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028416

16839230 - 16858018

18789

ENSAPLT00000013558

16837759 - 16857617

19859