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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16853176_16855665_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16853176 - 16855665

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATCACTTATCT

Flanking Amino Acid:

SSEHDPQNSESVFNLRDLGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

55.2

0.24

1.8

73.18

42.6

Associated Gene:

Gene:

YME1L1

Ensembl Gene ID:

ENSAPLG00000012942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028416

16839230 - 16858018

18789

ENSAPLT00000013558

16837759 - 16857617

19859