Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_16869462_16871280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16869462 - 16871280

Intron Length:

1819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACAAG

5'SS Class:

major

3'SS Sequence:

TGCCTGATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TTTGCCTGATTT

Flanking Amino Acid:

QKGRPYRVYQTPLQGDAGTP

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

63.9

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

62.1

0.27

1.1

64.2

40.6

Minor 5ss

44.2

-0.6

2.7

56.4

Minor BPS

59.2

0.37

1.8

80.66

41.5

Associated Gene:

Gene:

MASTL

Ensembl Gene ID:

ENSAPLG00000012632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024944

16864031 - 16876550

12520

ENSAPLT00000023037

16861323 - 16876550

15228

ENSAPLT00000019103

16861323 - 16876550

15228

ENSAPLT00000013152

16862357 - 16876550

14194