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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16927763_16930546_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16927763 - 16930546

Intron Length:

2784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGGATCTT

5'SS Class:

weak_major

3'SS Sequence:

GTTCAAGACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCATCCTCACTT

Flanking Amino Acid:

LILRILEAALMLDFAALTGG

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.1

56.8

41.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

45.1

-0.2

1.7

47.6

Minor 5ss

35.2

-1.7

3.6

54.5

44.2

Minor BPS

55.6

0.26

1.9

72.84

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036345

16925468 - 16930579

5112