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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17010174_17010921_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17010174 - 17010921

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

CTTCCAACATAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAC

U12 Branch Point Sequence:

TGTCTTCCAACA

Flanking Amino Acid:

VERARKYVLQSDGVQQTTYL

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.4

45.1

Major BPS

61.9

0.3

1.2

70.7

33.5

Major PPT

55.6

0.13

1.1

59.2

34.8

Minor 5ss

34.2

-1.8

3.5

46.9

48.4

Minor BPS

47.4

-0.2

1.8

62.42

37.3

Associated Gene:

Gene:

PDSS1

Ensembl Gene ID:

ENSAPLG00000011581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012115

17008713 - 17032380

23668