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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17034021_17034287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17034021 - 17034287

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGCTAT

5'SS Class:

major

3'SS Sequence:

CCTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TAAACATTAATG

Flanking Amino Acid:

SKVLLVAVSEDVIENILDLH

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

87.7

0.85

0.7

80.3

31.7

Minor 5ss

40.5

-1.1

3.2

55.8

48.5

Minor BPS

56.1

0.05

1.7

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044169

17032522 - 17048752

16231

ENSAPLT00000039026

17032522 - 17054251

21730