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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17035276_17035378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17035276 - 17035378

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGTAT

5'SS Class:

major

3'SS Sequence:

GGTATTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTGTCAGAAACT

Flanking Amino Acid:

RAHLIGVYTNRHGERWELQL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

71.9

35.8

Major BPS

0.57

73.6

28.6

Major PPT

79.5

0.66

0.9

Minor 5ss

31.9

-2.1

3.5

49.3

Minor BPS

47.8

-0

2.5

76.77

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039026

17032522 - 17054251

21730

ENSAPLT00000044169

17032522 - 17048752

16231