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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17035436_17035531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17035436 - 17035531

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GATTTCTTATTT

Flanking Amino Acid:

LKGSGKTPYSRNGDGRAVLR

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.1

0.79

0.7

81.4

30.6

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

64.8

0.54

1.6

77.49

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039026

17032522 - 17054251

21730

ENSAPLT00000044169

17032522 - 17048752

16231