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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17043606_17045711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17043606 - 17045711

Intron Length:

2106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTTGTTTGAAAC

Flanking Amino Acid:

PFGFMDSYDPNFVPNTSDDE

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.4

26.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

69.7

0.44

1.1

66.4

43.3

Minor 5ss

32.5

-2

3.3

40.3

40.1

Minor BPS

0.11

1.6

67.73

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044169

17032522 - 17048752

16231

ENSAPLT00000039026

17032522 - 17054251

21730