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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17046725_17046816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17046725 - 17046816

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATATCTTTATTT

Flanking Amino Acid:

DNYLIGFLLKLMEDRRADFT

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

76.4

0.6

0.9

71.5

39.3

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

0.58

1.5

78.98

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039026

17032522 - 17054251

21730

ENSAPLT00000044169

17032522 - 17048752

16231