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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17053757_17054128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17053757 - 17054128

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATTA

5'SS Class:

strong_major

3'SS Sequence:

TAATTGCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCATTTTAATT

Flanking Amino Acid:

QKANLNDFSEVHLLQQILQH

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.2

28.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.8

0.49

0.9

62.9

43.6

Minor 5ss

40.9

-1

3.2

48.2

Minor BPS

62.3

0.46

1.3

71.2

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039026

17032522 - 17054251

21730