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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17085206_17092962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17085206 - 17092962

Intron Length:

7757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TGTGTCTTAATC

Flanking Amino Acid:

EKYALFKNPQNFYLANKGKN

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

78.6

0.71

78.6

Major PPT

0.41

1.1

67.3

42.8

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

70.5

0.62

1.3

74.33

36.8

Associated Gene:

Gene:

APBB1IP

Ensembl Gene ID:

ENSAPLG00000011179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011661

17062439 - 17107599

45161