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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17165145_17168479_R

Intron Information:

Intron Rank:

140807

Intron Class:

major

Intron Phase:

Intron Coordinates:

17165145 - 17168479

Intron Length:

3335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TGCTGTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.9

36.9

Major BPS

64.1

0.35

1.2

45.5

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

42.2

-0.9

2.5

54.4

42.8

Minor BPS

49.3

-0

2.1

63.48

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035115

17165030 - 17171142

6113