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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17320998_17322794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17320998 - 17322794

Intron Length:

1797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCACCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCATGTTTACAT

Flanking Amino Acid:

IAYILREALMGLQHLHENKT

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

79.2

0.66

0.8

69.6

36.4

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

46.9

-0.1

2.1

65.31

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040563

17319349 - 17353661

34313

ENSAPLT00000037497

17319906 - 17348806

28901

ENSAPLT00000041298

17319349 - 17367130

47782