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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17322900_17341141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17322900 - 17341141

Intron Length:

18242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTAATTC

Flanking Amino Acid:

NGDQLWLVLELCNGGSVTDL

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

53.3

0.08

1.9

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040563

17319349 - 17353661

34313

ENSAPLT00000037497

17319906 - 17348806

28901

ENSAPLT00000041298

17319349 - 17367130

47782