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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1756321_1758249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1756321 - 1758249

Intron Length:

1929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTCTGTTTGATC

Flanking Amino Acid:

RHRHRHYEIKQSDDECVLDL

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

73.4

0.53

65.7

44.6

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

57.1

0.21

1.8

68.59

38.2

Associated Gene:

Gene:

DHX30

Ensembl Gene ID:

ENSAPLG00000015682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016419

1742829 - 1763102

20274