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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1773287_1775598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1773287 - 1775598

Intron Length:

2312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCCTTCTCACCT

Flanking Amino Acid:

GHLPAGGTVKIESHKLTFRE

Intron Amino Acid Position:

2202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

0.87

0.8

85.6

Major PPT

73.2

0.52

66.1

40.8

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

48.3

-0

1.9

62.74

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042487

1771256 - 1826066

54811

ENSAPLT00000024687

1771256 - 1826066

54811