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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17742652_17756919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17742652 - 17756919

Intron Length:

14268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTGA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

GDDLSKLTGKNVLIVEDIVG

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.8

38.4

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

-0.9

2.4

50.7

45.6

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

PRTFDC1

Ensembl Gene ID:

ENSAPLG00000009020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036825

17721446 - 17762641

41196

ENSAPLT00000028716

17717700 - 17762641

44942