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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17742652_17758362_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17742652 - 17758362

Intron Length:

15711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTGA

5'SS Class:

major

3'SS Sequence:

AATGTTTTGTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAACT

Flanking Amino Acid:

GDDLSKLTGKDIVGTGRTMK

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.8

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.7

0.22

1.2

64.6

45.2

Minor 5ss

-0.9

2.4

50.7

45.6

Minor BPS

82.1

1.09

32.8

Associated Gene:

Gene:

PRTFDC1

Ensembl Gene ID:

ENSAPLG00000009020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009421

17721446 - 17759092

37647