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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1775712_1776993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1775712 - 1776993

Intron Length:

1282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAATT

5'SS Class:

major

3'SS Sequence:

GATCTTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

CGTTGATAAACT

Flanking Amino Acid:

GSKANIKHKPGGGDVKIENQ

Intron Amino Acid Position:

2238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

77.9

36.7

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

70.8

0.47

44.1

Minor 5ss

37.4

-1.4

3.5

57.1

47.2

Minor BPS

-0.1

2.3

69.56

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016657

1773282 - 1826066

52785

ENSAPLT00000034979

1771256 - 1826066

54811

ENSAPLT00000043047

1771256 - 1826066

54811

ENSAPLT00000024785

1771256 - 1826066

54811

ENSAPLT00000042487

1771256 - 1826066

54811

ENSAPLT00000024687

1771256 - 1826066

54811

ENSAPLT00000040753

1771256 - 1826066

54811

ENSAPLT00000017725

1771256 - 1826066

54811

ENSAPLT00000037024

1771950 - 1826066

54117

ENSAPLT00000043162

1772287 - 1826066

53780