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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17758908_17760916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17758908 - 17760916

Intron Length:

2009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCCTCAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTGCCTCAATA

Flanking Amino Acid:

TSRPDGYRPDYYGFEIPDLF

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.9

0.43

62.1

37.7

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

69.3

0.6

1.6

79.52

37.1

Associated Gene:

Gene:

PRTFDC1

Ensembl Gene ID:

ENSAPLG00000009020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036825

17721446 - 17762641

41196

ENSAPLT00000028716

17717700 - 17762641

44942