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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17760994_17761591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17760994 - 17761591

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TGTATTGTATTT

Flanking Amino Acid:

DYNEYFRDLNHICVINDHGK

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

84.1

30.2

Major BPS

71.2

0.53

72.3

32.8

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

45.2

-0.5

2.8

57.4

40.7

Minor BPS

44.2

-0.3

2.1

64.26

Associated Gene:

Gene:

PRTFDC1

Ensembl Gene ID:

ENSAPLG00000009020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036825

17721446 - 17762641

41196

ENSAPLT00000028716

17717700 - 17762641

44942