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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17838074_17843730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17838074 - 17843730

Intron Length:

5657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GAATTTTTAATG

Flanking Amino Acid:

PESAVQFSFKDEENGNRQGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.6

84.9

22.8

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

61.2

0.21

1.3

57.58

38.3

Associated Gene:

Gene:

ARHGAP21

Ensembl Gene ID:

ENSAPLG00000008113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018448

17833307 - 17909533

76227

ENSAPLT00000008512

17833307 - 17909533

76227