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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17898378_17899762_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17898378 - 17899762

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTGT

5'SS Class:

major

3'SS Sequence:

TATCAAGAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTATCAAGAAAA

Flanking Amino Acid:

DESERKLLTKDETSPPKDKG

Intron Amino Acid Position:

1107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

72.6

39.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

47.4

-0.1

1.2

40.2

Minor 5ss

44.4

-0.6

2.5

59.5

44.9

Minor BPS

43.9

-0.4

57.28

40.9

Associated Gene:

Gene:

ARHGAP21

Ensembl Gene ID:

ENSAPLG00000008113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045391

17878556 - 17905410

26855

ENSAPLT00000008512

17833307 - 17909533

76227