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Intron Name: Anas_platyrhynchos_platyrhynchos_2_17901428_17901512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17901428 - 17901512

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGTTCTGAATA

Flanking Amino Acid:

VERLKTLKRLIHDLPEHHYE

Intron Amino Acid Position:

1258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.7

40.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

43.4

-0.7

2.9

Minor BPS

64.5

0.45

1.4

70.13

36.3

Associated Gene:

Gene:

ARHGAP21

Ensembl Gene ID:

ENSAPLG00000008113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045391

17878556 - 17905410

26855

ENSAPLT00000018448

17833307 - 17909533

76227

ENSAPLT00000008512

17833307 - 17909533

76227