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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1817800_1818957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1817800 - 1818957

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAATAG

5'SS Class:

major

3'SS Sequence:

TCCTGTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GCTTCCTGTATT

Flanking Amino Acid:

QQEKALQEPTGLPTAQIRQA

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

61.9

39.5

Major BPS

0.85

0.9

39.9

Major PPT

78.2

0.64

0.9

69.3

40.5

Minor 5ss

35.2

-1.7

3.4

46.1

49.1

Minor BPS

56.6

0.29

1.8

73.51

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043047

1771256 - 1826066

54811

ENSAPLT00000016657

1773282 - 1826066

52785

ENSAPLT00000034979

1771256 - 1826066

54811

ENSAPLT00000042487

1771256 - 1826066

54811

ENSAPLT00000024785

1771256 - 1826066

54811

ENSAPLT00000024687

1771256 - 1826066

54811

ENSAPLT00000040753

1771256 - 1826066

54811

ENSAPLT00000043162

1772287 - 1826066

53780

ENSAPLT00000017725

1771256 - 1826066

54811

ENSAPLT00000037024

1771950 - 1826066

54117