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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1821841_1824796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1821841 - 1824796

Intron Length:

2956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTGTTGATT

Flanking Amino Acid:

PDASFFVEPSADAQCVPASD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.8

0.69

0.7

77.5

31.2

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

63.3

0.5

86.06

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040753

1771256 - 1826066

54811