Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_18378383_18382011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18378383 - 18382011

Intron Length:

3629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCAA

5'SS Class:

major

3'SS Sequence:

GTTTATATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CCAACACTAACT

Flanking Amino Acid:

VETDEQTIQKLIEIQEQMKT

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.8

41.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.5

0.62

0.9

74.9

39.5

Minor 5ss

29.1

-2.4

3.4

38.6

46.4

Minor BPS

47.2

-0.1

63.75

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020885

18362838 - 18404634

41797