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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18552787_18554895_F

Intron Information:

Intron Rank:

130800

Intron Class:

major

Intron Phase:

Intron Coordinates:

18552787 - 18554895

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TCAGCTATAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

84.2

0.77

0.7

77.7

31.2

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

47.5

-0.1

65.01

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022497

18551968 - 18554994

3027