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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18569393_18625569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18569393 - 18625569

Intron Length:

56177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTTTTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

ATATCAGCAACT

Flanking Amino Acid:

MWGVNHSINELSHVQIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

61.8

43.5

Major BPS

68.7

0.47

0.9

67.9

Major PPT

87.2

0.84

0.6

81.3

30.8

Minor 5ss

37.2

-1.5

3.4

50.7

Minor BPS

47.1

-0.1

2.4

73.25

42.9

Associated Gene:

Gene:

PIP4K2A

Ensembl Gene ID:

ENSAPLG00000004521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004674

18569372 - 18673428

104057