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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18864799_18900174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18864799 - 18900174

Intron Length:

35376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGTTTCTGACAC

Flanking Amino Acid:

NFYDFLGVQQDASSADIRKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

86.2

0.81

0.7

84.1

30.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

49.7

-0

1.8

65.07

40.1

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691