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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18901288_18907649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18901288 - 18907649

Intron Length:

6362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCTCCATGAAAG

Flanking Amino Acid:

EILKDEERRQRYDDILINGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

76.4

0.59

0.8

71.3

34.4

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

47.8

-0.3

1.9

56.8

43.7

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691