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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18907816_18908730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18907816 - 18908730

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAACCTGTAACC

Flanking Amino Acid:

VWSIYLEKQLDELLTRKKRE

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

84.4

0.85

34.5

Major PPT

67.6

0.4

1.1

65.8

39.4

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

53.3

0.08

65.96

39.3

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691