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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18908829_18909878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18908829 - 18909878

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAAGA

5'SS Class:

major

3'SS Sequence:

TATTTGGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAATTTTTAATT

Flanking Amino Acid:

AKLAALDKNERVLDKPQWHD

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

67.8

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.4

0.6

69.9

41.1

Minor 5ss

-2.8

31.1

42.6

Minor BPS

69.5

0.69

1.1

75.84

34.7

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691