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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18909973_18919723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18909973 - 18919723

Intron Length:

9751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACTA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTTTCTTAAAG

Flanking Amino Acid:

TVKALPQLFQDARQLYVEYK

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.6

0.55

74.8

33.6

Minor 5ss

35.6

-1.6

3.2

48.3

47.2

Minor BPS

73.4

0.6

1.4

74.89

36.7

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691