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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18919815_18932388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18919815 - 18932388

Intron Length:

12574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTTTCTTTTTT

Flanking Amino Acid:

LAKAELETLQKEKKPKVKKP

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.7

33.3

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

84.3

0.77

0.9

80.6

Minor 5ss

-0.9

54.7

43.6

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691