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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18932556_18951204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18932556 - 18951204

Intron Length:

18649

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TGTTTTACAAAT

Flanking Amino Acid:

GNRNRAHKKKAPEWTEEDLS

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.6

1.12

0.8

80.1

34.5

Major BPS

73.5

0.59

81.3

29.9

Major PPT

73.2

0.52

65.4

44.5

Minor 5ss

30.2

-2.3

3.8

41.6

Minor BPS

48.1

-0

1.9

71.04

39.5

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045984

18864658 - 18964348

99691

ENSAPLT00000016977

18864658 - 18964348

99691