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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18963226_18964279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18963226 - 18964279

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTCA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAATA

Flanking Amino Acid:

IAKCVPGKSKEECIARYKLL

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

62.8

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

94.5

0.5

93.1

Minor 5ss

35.3

-1.7

3.5

47.9

47.7

Minor BPS

68.1

0.57

1.7

81.86

32.7

Associated Gene:

Gene:

DNAJC1

Ensembl Gene ID:

ENSAPLG00000016264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016977

18864658 - 18964348

99691