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Intron Name: Anas_platyrhynchos_platyrhynchos_2_18979861_18980497_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18979861 - 18980497

Intron Length:
637

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATAGA

5'SS Class:
strong_major

3'SS Sequence:
GTTTTTACACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTGTTTTTACAC

Flanking Amino Acid:
HQVHAFPVQAGDNLQRTKHQ

Intron Amino Acid Position:
871

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.9
80.4
34.2

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
74.9
0.56
1
68.2
42.2

Minor 5ss
34.4
-1.8
2.8
42.8
44

Minor BPS
54.9
0.13
1.7
66.43
39.7

Associated Gene:

Gene:
MLLT10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18970362 - 19086842
116481