Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_19034946_19038512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19034946 - 19038512

Intron Length:

3567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTAACTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCTTTTGTAACT

Flanking Amino Acid:

RSEKLHSMGQKYKEKDKHKQ

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

72.9

0.52

0.9

65.9

39.7

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

62.8

0.48

82.56

39.6

Associated Gene:

Gene:

MLLT10

Ensembl Gene ID:

ENSAPLG00000016316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025763

18970362 - 19086842

116481

ENSAPLT00000023469

18970487 - 19086842

116356

ENSAPLT00000017029

18970487 - 19081786

111300

ENSAPLT00000041215

18970487 - 19086842

116356