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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_19034946_19043866_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
19034946 - 19043866
Intron Length:
8921

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAGTGGA
5'SS Class:
strong_major
3'SS Sequence:
TTGTAACTCACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTGTAAC
U12 Branch Point Sequence:
TCTTTTGTAACT
Flanking Amino Acid:
QDKHHEKEKKKYKEKDKHKQ
Intron Amino Acid Position:
310

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.6
0.81
0.9
75.2
35.1
Major BPS
74.5
0.61
1.1
75.6
36.6
Major PPT
72.9
0.52
0.9
65.9
39.7
Minor 5ss
33.8
-1.8
3.2
40.4
40
Minor BPS
62.8
0.48
2
82.56
39.6

Associated Gene:

Gene:
MLLT10
Ensembl Gene ID:
ENSAPLG00000016316
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000045860
18970487 - 19086842
116356