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Intron Name: Anas_platyrhynchos_platyrhynchos_2_19141_20469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19141 - 20469

Intron Length:

1329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTGATT

Flanking Amino Acid:

LRVEGKLLDDLSKQKRKFSS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.5

37.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.65

73.2

Minor 5ss

40.3

-1.1

3.4

62.1

42.3

Minor BPS

66.4

0.6

1.3

81.5

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019825

3263 - 59790

56528

ENSAPLT00000018278

3263 - 59790

56528

ENSAPLT00000008903

3822 - 61680

57859

ENSAPLT00000046030

3263 - 59790

56528

ENSAPLT00000020394

3263 - 88619

85357