Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_19297165_19399867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19297165 - 19399867

Intron Length:

102703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTGAC

5'SS Class:

major

3'SS Sequence:

TTTATTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTTCTTTTATT

Flanking Amino Acid:

LKRTQEQISNVKYHEDFEKT

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

70.5

33.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.7

0.62

73.6

41.7

Minor 5ss

41.5

-0.9

3.2

56.1

42.1

Minor BPS

69.5

0.7

1.6

83.31

38.3

Associated Gene:

Gene:

NEBL

Ensembl Gene ID:

ENSAPLG00000005756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034117

19182332 - 19431805

249474

ENSAPLT00000028833

19182332 - 19441130

258799

ENSAPLT00000047944

19182332 - 19447344

265013

ENSAPLT00000046719

19182332 - 19431805

249474