Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_1938981_1939360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1938981 - 1939360

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

ATGAATTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGATACTAAACT

Flanking Amino Acid:

LPLRRIHSLPQRLLGSSPAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.4

39.5

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

69.2

0.43

62.7

43.2

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

61.1

0.43

1.9

79.01

42.5

Associated Gene:

Gene:

CDC25A

Ensembl Gene ID:

ENSAPLG00000008300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008649

1931791 - 1940295

8505