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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1946338_1950978_R

Intron Information:

Intron Rank:

135019

Intron Class:

major

Intron Phase:

Intron Coordinates:

1946338 - 1950978

Intron Length:

4641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019047

1946320 - 1962603

16284