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Intron Name: Anas_platyrhynchos_platyrhynchos_2_19580146_19582054_F

Intron Information:

Intron Rank:

142437

Intron Class:

major

Intron Phase:

Intron Coordinates:

19580146 - 19582054

Intron Length:

1909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTGTTTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

86.8

0.83

0.8

80.8

35.7

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

54.6

0.22

1.8

76.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040064

19580026 - 19583034

3009