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Intron Name: Anas_platyrhynchos_platyrhynchos_2_19643642_19646515_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19643642 - 19646515

Intron Length:

2874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGAAT

U12 Branch Point Sequence:

TTTTCCCCAACA

Flanking Amino Acid:

DWVDSGCPEESKDKICEKSV

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

55.1

0.13

1.4

64.3

39.7

Major PPT

79.1

0.65

0.8

74.7

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

68.3

0.57

1.9

84.96

34.3

Associated Gene:

Gene:

PLXDC2

Ensembl Gene ID:

ENSAPLG00000013705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046120

19619362 - 19757261

137900

ENSAPLT00000014293

19619362 - 19757261

137900