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Intron Name: Anas_platyrhynchos_platyrhynchos_2_19997392_20008515_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19997392 - 20008515

Intron Length:

11124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGATTTTAATG

Flanking Amino Acid:

DDIEFNNCTTAGEDPKECPA

Intron Amino Acid Position:

1614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

62.5

0.25

1.4

62.98

39.9

Associated Gene:

Gene:

MALRD1

Ensembl Gene ID:

ENSAPLG00000023464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032674

19913135 - 20166774

253640