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Intron Name: Anas_platyrhynchos_platyrhynchos_2_200622_205599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

200622 - 205599

Intron Length:

4978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TGATCCTGAATC

Flanking Amino Acid:

GVLTYHPSLHDYMQNVHGKE

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

69.6

0.49

59.5

Major PPT

78.2

0.63

0.8

72.5

32.2

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

69.3

0.58

1.4

73.44

36.9

Associated Gene:

Gene:

AGAP3

Ensembl Gene ID:

ENSAPLG00000009810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007060

161522 - 267922

106401

ENSAPLT00000020512

161522 - 246527

85006

ENSAPLT00000010208

161522 - 246527

85006